full draft - uploaded version
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@@ -48,3 +48,35 @@
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year={2008},
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publisher={The Royal Society}
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}
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@article{pauleve2020reconciling,
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title={Reconciling qualitative, abstract, and scalable modeling of biological networks},
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author={Paulev{\'e}, Lo{\"\i}c and Kol{\v{c}}{\'a}k, Juri and Chatain, Thomas and Haar, Stefan},
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journal={Nature communications},
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volume={11},
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number={1},
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pages={4256},
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year={2020},
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publisher={Nature Publishing Group UK London}
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}
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@article{mussel2010boolnet,
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title={BoolNet—an R package for generation, reconstruction and analysis of Boolean networks},
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author={M{\"u}ssel, Christoph and Hopfensitz, Martin and Kestler, Hans A},
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journal={Bioinformatics},
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volume={26},
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number={10},
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pages={1378--1380},
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year={2010},
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publisher={Oxford University Press}
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}
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@article{naldi2018colomoto,
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title={The CoLoMoTo interactive notebook: accessible and reproducible computational analyses for qualitative biological networks},
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author={Naldi, Aur{\'e}lien and Hernandez, C{\'e}line and Levy, Nicolas and Stoll, Gautier and Monteiro, Pedro T and Chaouiya, Claudine and Helikar, Tom{\'a}{\v{s}} and Zinovyev, Andrei and Calzone, Laurence and Cohen-Boulakia, Sarah and others},
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journal={Frontiers in physiology},
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volume={9},
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pages={680},
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year={2018},
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publisher={Frontiers Media SA}
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}
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